STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72263.1KEGG: mar:MAE_40420 hypothetical protein. (138 aa)    
Predicted Functional Partners:
ACK72262.1
KEGG: npu:Npun_R2945 hypothetical protein.
       0.778
ACK71475.1
KEGG: npu:Npun_R5786 hypothetical protein.
  
     0.648
ACK70279.1
KEGG: ava:Ava_1707 hypothetical protein.
  
     0.610
ACK69745.1
KEGG: mar:MAE_11000 hypothetical protein.
  
     0.557
ACK72264.1
PFAM: DinB family protein; KEGG: pla:Plav_0271 DinB family protein.
       0.553
ACK71655.1
PFAM: Forkhead-associated protein; KEGG: mar:MAE_25310 FHA domain containing protein.
  
     0.498
ACK71005.1
Putative transcription regulator with HTH domain; KEGG: mar:MAE_62590 hypothetical protein.
  
     0.484
ACK72261.1
KEGG: mar:MAE_56120 hypothetical protein.
       0.456
ACK71466.1
KEGG: mar:MAE_57910 hypothetical protein.
  
     0.452
ACK68856.1
KEGG: mar:MAE_45640 hypothetical protein.
  
     0.423
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.