STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72354.1PFAM: periplasmic solute binding protein; KEGG: syc:syc0237_d Mn transporter MntC; Belongs to the bacterial solute-binding protein 9 family. (354 aa)    
Predicted Functional Partners:
ACK72353.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ana:all3575 putative manganese transport system ATP-binding protein.
 
  
 0.971
ACK73104.1
PFAM: ABC-3 protein; KEGG: ava:Ava_1599 hypothetical protein.
  
 0.954
ACK70966.1
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: ter:Tery_3358 hypothetical protein.
  
 0.951
ACK70968.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ter:Tery_3219 ABC transporter related.
 
  
 0.939
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.578
rpmB
PFAM: ribosomal protein L28; KEGG: amr:AM1_2695 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.570
ACK71590.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: npu:Npun_R3841 cobalamin synthesis protein, P47K.
  
  
 0.441
ACK70030.1
TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mar:MAE_12330 cobalamin synthesis protein CobW homolog.
  
  
 0.423
ACK71058.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mar:MAE_31460 cobalamin synthesis protein CobW homolog.
  
  
 0.423
ACK72226.1
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ava:Ava_B0228 cobalamin synthesis protein/P47K.
  
  
 0.423
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.