STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72414.1PFAM: band 7 protein; KEGG: syn:sll1021 hypothetical protein. (693 aa)    
Predicted Functional Partners:
ACK72415.1
KEGG: syn:sll0994 hypothetical protein.
 
     0.906
ACK70668.1
PFAM: protein of unknown function DUF107; KEGG: ana:alr2471 hypothetical protein.
 
  
 0.743
ACK69851.1
PFAM: beta-lactamase domain protein; KEGG: syn:sll0647 hypothetical protein.
  
     0.639
ACK69850.1
Adenylate/guanylate cyclase with Chase sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: ter:Tery_4585 adenylate/guanylate cyclase.
  
     0.550
ACK69960.1
KEGG: mag:amb0440 hypothetical protein.
  
     0.530
ACK69959.1
KEGG: syn:slr1659 hypothetical protein.
  
     0.522
ACK69903.1
KEGG: ava:Ava_3370 hypothetical protein.
  
    0.463
ACK69849.1
PFAM: protein of unknown function DUF928; KEGG: ter:Tery_4586 hypothetical protein.
  
     0.443
ACK72209.1
Chromosome segregation ATPase-like protein; KEGG: syn:slr1567 hypothetical protein.
 
    0.436
ACK69902.1
KEGG: npu:Npun_R4212 hypothetical protein.
  
    0.426
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.