STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72528.1PFAM: metallophosphoesterase; KEGG: mar:MAE_46320 metallophosphoesterase. (364 aa)    
Predicted Functional Partners:
ACK73619.1
KEGG: ter:Tery_4948 hypothetical protein.
  
     0.608
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.601
ACK69332.1
SMART: Tetratricopeptide domain protein; KEGG: mar:MAE_53600 tetratricopeptide TPR_2.
  
 
   0.572
ACK70052.1
PFAM: protein of unknown function DUF721; KEGG: ava:Ava_0164 hypothetical protein.
  
     0.514
ACK70403.1
KEGG: ava:Ava_2541 alkaline phosphatase-like.
 
  
 0.478
ACK70528.1
PFAM: Ankyrin; KEGG: ava:Ava_3944 ankyrin.
  
 
 
 0.464
ACK71981.1
PFAM: 5'-Nucleotidase domain protein; KEGG: syf:Synpcc7942_1392 alkaline phosphatase.
  
  
 0.453
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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