STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72619.1Hypothetical protein; KEGG: min:Minf_2065 glycosyltransferase. (232 aa)    
Predicted Functional Partners:
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
  
 
 0.539
ACK72618.1
PFAM: glycosyl transferase group 1; KEGG: mhu:Mhun_0395 glycosyl transferase, group 1.
  
    0.534
ACK72617.1
PFAM: glycosyl transferase family 2; KEGG: ter:Tery_4122 glycosyl transferase family protein.
       0.529
ACK72620.1
PFAM: Radical SAM domain protein; KEGG: pca:Pcar_1835 hypothetical protein.
  
    0.500
ACK72621.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_1987 hypothetical protein.
  
    0.426
ACK72616.1
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3648 glycosyl transferase family protein.
  
    0.409
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.