STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72740.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2. (540 aa)    
Predicted Functional Partners:
ACK72741.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ter:Tery_0385 ECF subfamily RNA polymerase sigma-24 factor.
 
    0.835
ACK68949.1
PFAM: RimK domain protein ATP-grasp; KEGG: npu:Npun_R1001 RimK domain-containing protein ATP-grasp.
  
     0.761
ACK72372.1
KEGG: bja:blr1104 hypothetical protein.
  
     0.759
ACK73259.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmf:P9303_24081 hypothetical protein.
  
     0.665
ACK70840.1
PFAM: Heat shock protein 70; KEGG: fal:FRAAL2972 hypothetical protein; putative ricin B lectin and actin-like ATPase domains.
  
 0.580
ACK70841.1
Heat shock protein 70; PFAM: Tetratricopeptide TPR_2 repeat protein; Heat shock protein 70; SMART: Tetratricopeptide domain protein; KEGG: aau:AAur_3285 putative DnaK family protein.
  
 0.580
ACK70848.1
Hypothetical protein; KEGG: fra:Francci3_0322 WD-40 repeat-containing protein.
  
 0.580
ACK72739.1
Hypothetical protein.
       0.490
ACK73623.1
TIGRFAM: transposase; transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: dge:Dgeo_0928 transposase, IS605 OrfB.
  
     0.472
ACK73701.1
TIGRFAM: transposase; transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: dge:Dgeo_0928 transposase, IS605 OrfB.
  
     0.472
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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