STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72748.1Protein of unknown function DUF1400; PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; protein of unknown function DUF1400; KEGG: syp:SYNPCC7002_A0234 hypothetical protein. (605 aa)    
Predicted Functional Partners:
ACK73364.1
KEGG: ava:Ava_1851 hypothetical protein.
  
     0.711
ACK72408.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: npu:Npun_F0844 peptidase C14, caspase catalytic subunit P20.
  
     0.683
ACK69514.1
Conserved hypothetical protein; KEGG: ana:alr3801 unknown protein.
  
     0.644
ACK72183.1
KEGG: npu:Npun_R4177 hypothetical protein.
  
     0.576
ACK68539.1
KEGG: npu:Npun_F3584 cell wall hydrolase/autolysin.
  
     0.560
ACK72992.1
KEGG: npu:Npun_F3292 hypothetical protein.
  
     0.552
ACK68771.1
KEGG: mar:MAE_54360 hypothetical protein.
  
     0.548
ACK73374.1
KEGG: npu:Npun_F4465 hypothetical protein.
  
     0.509
xseB
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.506
ACK71089.1
KEGG: npu:Npun_R3491 hypothetical protein.
  
     0.499
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.