Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACK72763.1 | ACK72764.1 | PCC7424_4399 | PCC7424_4400 | ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | KEGG: tcr:503419.50 RNA-binding protein RGGm, putative Pfam: Collagen RRM_3 RRM_1 PROSITE: GLY_RICH RRM. | 0.489 |
ACK72764.1 | ACK72763.1 | PCC7424_4400 | PCC7424_4399 | KEGG: tcr:503419.50 RNA-binding protein RGGm, putative Pfam: Collagen RRM_3 RRM_1 PROSITE: GLY_RICH RRM. | ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | 0.489 |
ACK72764.1 | trpD-2 | PCC7424_4400 | PCC7424_4401 | KEGG: tcr:503419.50 RNA-binding protein RGGm, putative Pfam: Collagen RRM_3 RRM_1 PROSITE: GLY_RICH RRM. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.570 |
trpD-2 | ACK72764.1 | PCC7424_4401 | PCC7424_4400 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | KEGG: tcr:503419.50 RNA-binding protein RGGm, putative Pfam: Collagen RRM_3 RRM_1 PROSITE: GLY_RICH RRM. | 0.570 |