STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72771.1KEGG: npu:Npun_R6531 hypothetical protein. (475 aa)    
Predicted Functional Partners:
ACK70553.1
KEGG: ter:Tery_4130 hypothetical protein.
  
     0.754
ACK71133.1
KEGG: mar:MAE_53690 hypothetical protein.
  
     0.742
ACK71702.1
KEGG: syn:ssr0657 hypothetical protein.
  
     0.734
ACK69411.1
KEGG: amr:AM1_0853 hypothetical protein.
  
     0.690
ACK72977.1
KEGG: mar:MAE_28340 hypothetical protein.
  
     0.674
ACK73507.1
KEGG: amr:AM1_3902 hypothetical protein.
  
     0.643
ACK73227.1
KEGG: mar:MAE_04000 glycogen debranching enzyme.
  
     0.642
ACK69204.1
PFAM: protein of unknown function DUF445; KEGG: npu:Npun_R4433 hypothetical protein.
  
     0.641
ACK68974.1
PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; SMART: Tetratricopeptide domain protein; KEGG: mar:MAE_41210 heat shock protein DnaJ-like.
  
 
   0.637
ACK72772.1
PFAM: WD-40 repeat protein; KEGG: npu:Npun_F4790 WD-40 repeat-containing protein.
 
    
0.634
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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