STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaXDNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (730 aa)    
Predicted Functional Partners:
ACK71566.1
TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: mar:MAE_51410 DNA polymerase III delta prime subunit.
 
 
0.997
ACK71852.1
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: mar:MAE_25290 DNA polymerase III delta subunit.
 
 
 0.997
ACK68808.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.996
ACK71799.1
KEGG: mar:MAE_39160 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; Hedgehog/intein hint domain protein.
  
 0.988
ACK73257.1
DNA-directed DNA polymerase; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mar:MAE_37530 DNA polymerase III alpha subunit.
  
 0.988
ACK68989.1
PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mar:MAE_37950 single-stranded DNA-binding protein.
    
 
 0.881
ACK71787.1
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mar:MAE_39060 single-stranded DNA-binding protein.
    
 
 0.881
ACK68561.1
PFAM: Exonuclease RNase T and DNA polymerase III; SMART: AAA ATPase; Exonuclease; KEGG: syn:slr1959 hypothetical protein.
   
 
 0.874
ACK69782.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
 
 
 0.833
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
  
 0.729
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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