STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72812.1PFAM: Patatin; KEGG: mar:MAE_28040 hypothetical protein. (365 aa)    
Predicted Functional Partners:
ACK72813.1
PFAM: MscS Mechanosensitive ion channel; KEGG: mar:MAE_41850 mechanosensitive ion channel family protein.
 
     0.717
ACK68961.1
TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit; PFAM: Poly(R)-hydroxyalkanoic acid synthase class III PhaE subunit; KEGG: mar:MAE_50040 putative poly(3-hydroxyalkanoate) synthase component.
  
   
 0.711
ACK68962.1
TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; PFAM: alpha/beta hydrolase fold; KEGG: mar:MAE_50030 poly(3-hydroxyalkanoate) synthase.
 
   
 0.679
ACK68972.1
PFAM: MscS Mechanosensitive ion channel; KEGG: mar:MAE_41850 mechanosensitive ion channel family protein.
  
     0.488
ACK72811.1
PFAM: protein of unknown function DUF820; KEGG: mar:MAE_41040 hypothetical protein.
       0.446
ACK69424.1
KEGG: syn:sll1503 hypothetical protein.
  
     0.403
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.