STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72833.1PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bsu:BSU39840 short chain dehydrogenase. (293 aa)    
Predicted Functional Partners:
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
  
 
 0.742
ACK72834.1
TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rxy:Rxyl_2045 peptidase C56, PfpI.
  
    0.671
ACK69280.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ana:all1695 probable peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.573
ACK73338.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: ter:Tery_2968 amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.573
ACK71146.1
Erythronolide synthase., Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_F3359 beta-ketoacyl synthase.
  
 
 0.558
ACK69498.1
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: npu:Npun_F0100 malonyl CoA-acyl carrier protein transacylase.
 
 0.527
ACK68785.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ter:Tery_3992 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.504
ACK69652.1
PFAM: sulfatase; KEGG: mac:MA2648 arylsulfatase.
   
 
 0.427
ACK72213.1
PFAM: sulfatase; KEGG: mac:MA2645 arylsulfatase.
   
 
 0.427
ACK72439.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.422
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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