STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72859.1KEGG: npu:Npun_F4077 hypothetical protein. (97 aa)    
Predicted Functional Partners:
clpS-2
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.803
ACK69909.1
KEGG: mar:MAE_58970 hypothetical protein.
  
     0.637
ACK70484.1
KEGG: mar:MAE_22030 hypothetical protein; Belongs to the BI1 family.
  
     0.618
ACK70257.1
PFAM: TM2 domain containing protein; KEGG: npu:Npun_R6445 TM2 domain-containing protein.
  
     0.576
ACK68720.1
KEGG: ana:asl3851 hypothetical protein.
  
     0.550
ACK68679.1
KEGG: mar:MAE_36910 hypothetical protein.
  
     0.546
ACK72857.1
TIGRFAM: hydrogenase maturation protease; KEGG: mar:MAE_02970 hypothetical protein.
       0.546
ACK68496.1
KEGG: npu:Npun_F6616 hypothetical protein.
  
     0.533
ACK68844.1
KEGG: npu:Npun_F5573 hypothetical protein.
  
     0.500
ACK69342.1
KEGG: mar:MAE_52580 hypothetical protein.
  
     0.486
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.