STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK72953.1Conserved hypothetical protein; KEGG: rrs:RoseRS_0470 type I phosphodiesterase/nucleotide pyrophosphatase. (565 aa)    
Predicted Functional Partners:
ACK69524.1
Hypothetical protein; KEGG: npu:Npun_F3786 signal transduction histidine kinase (STHK), LytS.
  
     0.516
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
 
     0.488
ACK72768.1
Conserved hypothetical protein; KEGG: ana:alr5330 unknown protein.
  
     0.486
ACK70716.1
KEGG: syn:slr1100 hypothetical protein.
  
     0.459
ACK69356.1
Putative transcription regulator with HTH domain; KEGG: mar:MAE_44960 hypothetical protein.
  
     0.455
ACK72825.1
KEGG: npu:Npun_F3088 hypothetical protein.
  
     0.452
ACK69755.1
Conserved hypothetical protein; KEGG: ana:alr5330 unknown protein.
  
     0.436
ACK70828.1
PFAM: DNA polymerase beta domain protein region; KEGG: mta:Moth_0416 hypothetical protein.
  
     0.426
ACK71167.1
KEGG: npu:Npun_F4628 hypothetical protein.
  
     0.422
ACK72004.1
KEGG: amr:AM1_0049 nucleoside-diphosphate-sugar epimerase, putative.
  
     0.410
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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