STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73006.1PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: noc:Noc_1799 NADH-flavin oxidoreductase/NADH oxidase. (481 aa)    
Predicted Functional Partners:
ACK73007.1
KEGG: amr:AM1_2567 hypothetical protein.
 
     0.904
ACK73009.1
KEGG: amr:AM1_2569 hypothetical protein.
 
     0.860
ACK73005.1
KEGG: noc:Noc_1800 hypothetical protein.
 
     0.749
ACK73564.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mar:MAE_49470 uncharacterized zinc-type alcohol dehydrogenase-like protein.
 
  
 0.643
ACK73008.1
KEGG: amr:AM1_2568 hypothetical protein.
       0.620
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
  
  
 0.503
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.454
ACK73102.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mar:MAE_56910 zinc-containing alcohol dehydrogenase superfamily.
 
  
 0.405
ACK70111.1
Esterase-like protein; KEGG: amr:AM1_0889 esterase, putative.
 
  
 0.400
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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