STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73139.1KEGG: sme:SMb20926 hypothetical protein. (177 aa)    
Predicted Functional Partners:
ACK70148.1
TIGRFAM: CRISPR-associated protein Csc3; KEGG: syp:SYNPCC7002_D0024 hypothetical protein.
  
     0.659
ACK73665.1
KEGG: npu:Npun_R4652 hypothetical protein.
  
     0.629
ACK70150.1
TIGRFAM: CRISPR-associated protein Csc1; KEGG: syp:SYNPCC7002_D0022 hypothetical protein.
  
     0.562
ACK71063.1
KEGG: ava:Ava_2402 sensor protein.
  
     0.561
ACK73138.1
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: npu:Npun_R5519 dihydroxyacetone kinase, L subunit.
       0.546
ACK70149.1
TIGRFAM: CRISPR-associated protein Csc2; KEGG: syp:SYNPCC7002_D0023 hypothetical protein.
  
     0.545
ACK70848.1
Hypothetical protein; KEGG: fra:Francci3_0322 WD-40 repeat-containing protein.
  
     0.519
ACK70820.1
KEGG: npu:Npun_R0608 hypothetical protein.
  
     0.486
ACK70147.1
CRISPR-associated helicase, Cyano-type; KEGG: syp:SYNPCC7002_D0025 hypothetical protein; TIGRFAM: CRISPR-associated helicase, Cyano-type; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases.
  
     0.478
ACK69924.1
KEGG: ter:Tery_0192 hypothetical protein.
  
     0.458
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.