STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73150.1PFAM: WD-40 repeat protein; SMART: TIR protein; KEGG: mar:MAE_37440 WD-repeat protein. (1363 aa)    
Predicted Functional Partners:
ACK70236.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_1102 tetratricopeptide TPR_2.
  
 
  0.601
ACK72457.1
PFAM: TPR repeat-containing protein; NB-ARC domain protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ana:all2787 probable kinesin light chain.
  
 
  0.561
ACK68882.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ana:all3838 similar to kinesin light chain.
  
 
  0.560
ACK72245.1
NB-ARC domain protein; PFAM: TPR repeat-containing protein; NB-ARC domain protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_R4603 NB-ARC domain-containing protein.
  
 
  0.551
ACK71281.1
NB-ARC domain protein; PFAM: TPR repeat-containing protein; NB-ARC domain protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_R4603 NB-ARC domain-containing protein.
  
 
  0.544
ACK69737.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_F0583 TPR repeat-containing protein.
  
 
  0.509
ACK69890.1
PFAM: beta-lactamase domain protein; KEGG: mar:MAE_60380 beta-lactamase-like protein.
    
  0.450
ACK69319.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_R1943 TPR repeat-containing protein.
 
 
  0.441
ACK69320.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: npu:Npun_R1943 TPR repeat-containing protein.
 
 
  0.436
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.431
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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