STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73221.1KEGG: sil:SPO0844 hypothetical protein. (312 aa)    
Predicted Functional Partners:
ACK68704.1
KEGG: mca:MCA0049 cellulose-binding domain-containing protein.
  
     0.626
ACK73638.1
PFAM: glycosyl transferase family 2; KEGG: ppg:PputGB1_2718 glycosyl transferase family 2.
  
     0.623
ACK68705.1
KEGG: mca:MCA1422 hypothetical protein.
  
     0.586
ACK73634.1
PFAM: glycosyl transferase group 1; KEGG: rde:RD1_B0006 glycosyl transferase, putative.
  
     0.522
ACK71066.1
PFAM: polysaccharide biosynthesis protein; KEGG: amr:AM1_3170 polysaccharide biosynthesis protein, putative.
  
     0.517
ACK73222.1
KEGG: pde:Pden_0843 hypothetical protein.
 
    
0.491
ACK73640.1
PFAM: glycosyl transferase family 2; KEGG: amr:AM1_0936 glycosyl transferase, group 2 family protein.
  
     0.491
ACK68706.1
KEGG: amr:AM1_0644 hypothetical protein.
  
     0.446
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.