STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73255.1PFAM: protein of unknown function DUF92 transmembrane; KEGG: ava:Ava_4223 hypothetical protein. (250 aa)    
Predicted Functional Partners:
ACK71432.1
PFAM: protein of unknown function YGGT; KEGG: npu:Npun_F5950 protein of unknown function YGGT.
  
     0.699
ACK73106.1
KEGG: ter:Tery_4494 hypothetical protein.
  
     0.658
ACK73285.1
PFAM: photosystem II manganese-stabilizing protein PsbO; KEGG: mar:MAE_44250 photosystem II manganese-stabilizing polypeptide.
  
     0.657
ACK69608.1
KEGG: mar:MAE_12930 phytoene dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase.
  
     0.656
ACK68926.1
PFAM: NnrUfamily protein; KEGG: mar:MAE_42990 hypothetical protein.
  
     0.647
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: mar:MAE_38680 glutamate-1-semialdehyde aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
 
      0.646
ACK69137.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.626
ACK69247.1
KEGG: mar:MAE_07250 hypothetical protein.
  
     0.618
ACK70579.1
KEGG: mar:MAE_41890 hypothetical protein.
  
     0.616
ACK72873.1
KEGG: mar:MAE_37870 hypothetical protein.
  
     0.608
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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