STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73280.1PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: ter:Tery_4430 peptidase S13, D-Ala-D-Ala carboxypeptidase C. (433 aa)    
Predicted Functional Partners:
ACK72700.1
KEGG: npu:Npun_R1733 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C.
  
  
  0.963
ACK70803.1
PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: mar:MAE_53230 D-alanyl-D-alanine carboxypeptidase.
  
  
  0.933
ACK69495.1
PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: mar:MAE_19490 putative peptidase.
  
  
 
0.912
ACK73279.1
KEGG: amr:AM1_0700 hypothetical protein.
       0.773
ACK73278.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: aba:Acid345_3783 putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily.
       0.741
ACK70782.1
KEGG: syp:SYNPCC7002_A2419 hypothetical protein.
  
     0.642
ACK72053.1
KEGG: mar:MAE_57850 hypothetical protein.
  
     0.595
ACK70373.1
KEGG: npu:Npun_R5777 hypothetical protein.
  
     0.553
ACK72849.1
KEGG: mar:MAE_18630 hypothetical protein.
  
     0.539
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.536
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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