STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73317.1KEGG: ava:Ava_2261 hypothetical protein. (133 aa)    
Predicted Functional Partners:
ACK72986.1
KEGG: npu:Npun_F0340 cupin 2 domain-containing protein.
  
     0.596
ACK69797.1
Conserved hypothetical protein; KEGG: ana:alr1002 unknown protein.
  
     0.550
ACK72054.1
KEGG: syn:sll1571 hypothetical protein.
  
     0.529
ACK73318.1
PFAM: UvrD/REP helicase; KEGG: mar:MAE_06680 putative DNA helicase.
       0.529
ACK71578.1
KEGG: npu:Npun_F4260 hypothetical protein.
  
     0.497
ACK73568.1
Signal transduction histidine kinase, LytS; KEGG: npu:Npun_R1884 hypothetical protein.
  
     0.488
ACK71583.1
KEGG: npu:Npun_F4262 hypothetical protein.
  
     0.485
ACK70392.1
KEGG: mar:MAE_58510 hypothetical protein.
  
     0.464
ACK73471.1
KEGG: npu:Npun_F4262 hypothetical protein.
  
     0.458
ACK70835.1
KEGG: ana:alr7656 hypothetical protein.
  
     0.457
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.