STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73325.1PFAM: BioY protein; KEGG: mar:MAE_00160 putative biotin biosynthesis protein. (220 aa)    
Predicted Functional Partners:
ACK69340.1
PFAM: cobalt transport protein; KEGG: mar:MAE_00820 cobalt transport system permease protein CbiQ homolog.
 
 0.962
ACK71116.1
PFAM: cobalt transport protein; KEGG: mar:MAE_31360 hypothetical protein.
 
 0.958
ACK69333.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mar:MAE_53610 ABC-transporter ATP-binding protein.
   
 0.949
ACK71379.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syn:sll1623 NdhM component of NDH-1 complex of cyanobacteria and plant chloroplasts, putative ABC-type cobalt transport system ATP-binding protein.
   
 0.949
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.885
ACK70608.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: gvi:gll0290 cobalt ABC transporter permease protein CbiQ homolog.
  
 
 0.770
ACK72203.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: ava:Ava_1757 cobalt transport protein.
  
 
 0.770
ACK69005.1
Cobalt ABC transporter, ATPase subunit; KEGG: mar:MAE_60710 ABC-transporter ATP-binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 
 0.757
ACK72204.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ava:Ava_1756 cobalt transport protein ATP-binding subunit.
   
 
 0.757
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
  
  
 0.637
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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