STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73353.1Hypothetical protein; KEGG: amr:AM1_5880 N-terminal cleavage/methylation domain protein. (215 aa)    
Predicted Functional Partners:
ACK73352.1
Hypothetical protein; KEGG: amr:AM1_3317 prepilin-type N-cleavage/methylation domain protein.
  
 
 0.904
ACK73354.1
Hypothetical protein; KEGG: mar:MAE_35740 type 4 pilin-like protein.
       0.773
ACK72554.1
PFAM: type II secretion system protein; KEGG: mar:MAE_04110 pilin biogenesis protein.
  
  
 0.599
ACK70032.1
PFAM: ComEC/Rec2-related protein; KEGG: mar:MAE_58670 competence protein.
 
  
 0.573
ACK72629.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ava:Ava_0971 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.570
ACK72334.1
KEGG: syn:sll1921 hypothetical protein.
  
    0.567
ACK70686.1
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mar:MAE_04090 pilus biogenesis protein.
  
 
 0.525
ACK72552.1
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mar:MAE_04090 pilus biogenesis protein.
  
 
 0.525
ACK72914.1
KEGG: syn:sll1921 hypothetical protein.
  
    0.518
ACK73355.1
KEGG: mar:MAE_53490 hypothetical protein.
     
 0.505
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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