STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73427.1PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: npu:Npun_F0232 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (339 aa)    
Predicted Functional Partners:
ACK69794.1
PFAM: cyclase/dehydrase; KEGG: npu:Npun_R6238 cyclase/dehydrase.
 
     0.629
ACK69796.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: npu:Npun_R2418 alcohol dehydrogenase.
 
  
 0.581
ACK70306.1
Beta-ketoacyl synthase; PFAM: alpha/beta hydrolase fold; sulfotransferase; AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: syp:SYNPCC7002_A1173 polyketide synthase.
  
 
 0.531
ACK73428.1
Hypothetical protein.
       0.523
ACK73338.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: ter:Tery_2968 amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.507
ACK71146.1
Erythronolide synthase., Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_F3359 beta-ketoacyl synthase.
  
 
 0.490
ACK73182.1
KEGG: gvi:gsr3245 hypothetical protein.
  
     0.488
ACK71120.1
KEGG: npu:Npun_R3530 hypothetical protein.
  
     0.404
ACK71188.1
Conserved hypothetical protein; KEGG: ana:alr3091 unknown protein.
  
     0.400
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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