STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK73567.1PFAM: peptidase M48 Ste24p; KEGG: amr:AM1_0560 peptidase, M48B family. (676 aa)    
Predicted Functional Partners:
ACK73566.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: npu:Npun_AR143 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
  
    0.520
ACK69532.1
PFAM: glycosyl transferase family 39; KEGG: mar:MAE_24320 glycosyl transferase family 39.
  
 
   0.479
ACK73565.1
KEGG: mar:MAE_24590 hypothetical protein.
 
     0.461
ACK70356.1
KEGG: mar:MAE_36950 hypothetical protein.
 
     0.453
ACK72189.1
KEGG: mar:MAE_15310 hypothetical protein.
  
     0.425
Your Current Organism:
Gloeothece citriformis
NCBI taxonomy Id: 65393
Other names: Cyanothece sp. PCC 7424, G. citriformis PCC 7424, Gloeothece citriformis PCC 7424, Synechococcus sp. ATCC 29155 (no longer available), Synechococcus sp. PCC 7424
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.