STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER51982.1Iron complex outermembrane recepter protein. (719 aa)    
Predicted Functional Partners:
SER51954.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.940
SER51927.1
Hypothetical protein.
       0.724
SES37976.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.715
SES30572.1
Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.553
SER57258.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.526
SER52024.1
Membrane protein.
       0.515
SES37890.1
Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.512
SER51296.1
Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.495
SES30585.1
Outer membrane receptor for ferrienterochelin and colicins.
 
  
 0.495
SES27022.1
Iron complex outermembrane recepter protein.
  
  
 0.458
Your Current Organism:
Pseudomonas bauzanensis
NCBI taxonomy Id: 653930
Other names: CGMCC 1.9095, DSM 22558, LMG 26048, LMG:26048, P. bauzanensis, Pseudomonas bauzanensis Zhang et al. 2011, Pseudomonas sp. BZ93, strain BZ93
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