STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES29219.1Modulator of FtsH protease; Belongs to the BI1 family. (222 aa)    
Predicted Functional Partners:
SES29180.1
tRNA 2-thiouridine synthesizing protein C; Belongs to the DsrF/TusC family.
       0.703
SES29198.1
tRNA 2-thiouridine synthesizing protein D.
       0.703
tusE
tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system.
     
 0.676
dsrH
tRNA 2-thiouridine synthesizing protein B.
       0.663
SES29116.1
Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.657
SER68822.1
Membrane protein required for colicin V production.
  
    0.563
htpX
Heat shock protein. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family.
  
  
 0.557
bamE
Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
    0.500
SES36767.1
TIGR02099 family protein.
  
     0.441
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
     0.430
Your Current Organism:
Pseudomonas bauzanensis
NCBI taxonomy Id: 653930
Other names: CGMCC 1.9095, DSM 22558, LMG 26048, LMG:26048, P. bauzanensis, Pseudomonas bauzanensis Zhang et al. 2011, Pseudomonas sp. BZ93, strain BZ93
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