Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ41461.1 | AMQ43578.1 | AMS64_03155 | AMS64_15085 | LafB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.928 |
| AMQ41461.1 | AMQ44966.1 | AMS64_03155 | AMS64_03040 | LafB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.868 |
| AMQ41461.1 | fliE | AMS64_03155 | AMS64_07285 | LafB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.879 |
| AMQ41461.1 | mltC | AMS64_03155 | AMS64_04215 | LafB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.534 |
| AMQ41642.1 | AMQ41643.1 | AMS64_04205 | AMS64_04210 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Iron transporter; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.805 |
| AMQ41642.1 | mltC | AMS64_04205 | AMS64_04215 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.567 |
| AMQ41643.1 | AMQ41642.1 | AMS64_04210 | AMS64_04205 | Iron transporter; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.805 |
| AMQ41643.1 | mltC | AMS64_04210 | AMS64_04215 | Iron transporter; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.620 |
| AMQ42464.1 | mltC | AMS64_08810 | AMS64_04215 | dsDNA-mimic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.524 |
| AMQ42464.1 | mukB | AMS64_08810 | AMS64_08895 | dsDNA-mimic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein MukB; SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AMQ42464.1 | mukE | AMS64_08810 | AMS64_08890 | dsDNA-mimic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Condesin subunit E; Acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.758 |
| AMQ42464.1 | mukF | AMS64_08810 | AMS64_08885 | dsDNA-mimic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Condesin subunit F; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | 0.765 |
| AMQ43578.1 | AMQ41461.1 | AMS64_15085 | AMS64_03155 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | LafB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AMQ43578.1 | AMQ44966.1 | AMS64_15085 | AMS64_03040 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.864 |
| AMQ43578.1 | fliE | AMS64_15085 | AMS64_07285 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
| AMQ43578.1 | mltC | AMS64_15085 | AMS64_04215 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.534 |
| AMQ44966.1 | AMQ41461.1 | AMS64_03040 | AMS64_03155 | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | LafB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.868 |
| AMQ44966.1 | AMQ43578.1 | AMS64_03040 | AMS64_15085 | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.864 |
| AMQ44966.1 | fliE | AMS64_03040 | AMS64_07285 | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| AMQ44966.1 | mltC | AMS64_03040 | AMS64_04215 | Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.531 |
page 1 of 3