Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ41892.1 | AMQ42072.1 | AMS64_05560 | AMS64_06610 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| AMQ41892.1 | AMQ44699.1 | AMS64_05560 | AMS64_21235 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| AMQ41892.1 | AMQ44701.1 | AMS64_05560 | AMS64_21245 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
| AMQ41892.1 | birA | AMS64_05560 | AMS64_21800 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.443 |
| AMQ41892.1 | sucC | AMS64_05560 | AMS64_08275 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.641 |
| AMQ41892.1 | sucD | AMS64_05560 | AMS64_08280 | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.642 |
| AMQ42072.1 | AMQ41892.1 | AMS64_06610 | AMS64_05560 | DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| AMQ44699.1 | AMQ41892.1 | AMS64_21235 | AMS64_05560 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| AMQ44699.1 | AMQ44701.1 | AMS64_21235 | AMS64_21245 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| AMQ44701.1 | AMQ41892.1 | AMS64_21245 | AMS64_05560 | N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
| AMQ44701.1 | AMQ44699.1 | AMS64_21245 | AMS64_21235 | N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| birA | AMQ41892.1 | AMS64_21800 | AMS64_05560 | biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.443 |
| sucC | AMQ41892.1 | AMS64_08275 | AMS64_05560 | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.641 |
| sucC | sucD | AMS64_08275 | AMS64_08280 | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.999 |
| sucD | AMQ41892.1 | AMS64_08280 | AMS64_05560 | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.642 |
| sucD | sucC | AMS64_08280 | AMS64_08275 | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.999 |