Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ41903.1 | AMQ43173.1 | AMS64_05640 | AMS64_12775 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.619 |
| AMQ41903.1 | AMQ43804.1 | AMS64_05640 | AMS64_16360 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IUNH family. | 0.593 |
| AMQ41903.1 | AMQ44581.1 | AMS64_05640 | AMS64_20545 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.569 |
| AMQ41903.1 | dadA | AMS64_05640 | AMS64_10195 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid dehydrogenase; Oxidative deamination of D-amino acids. | 0.567 |
| AMQ41903.1 | hisA | AMS64_05640 | AMS64_09085 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
| AMQ41903.1 | psuG | AMS64_05640 | AMS64_05635 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.999 |
| AMQ41903.1 | purA | AMS64_05640 | AMS64_06885 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.582 |
| AMQ41903.1 | rbsC | AMS64_05640 | AMS64_09390 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribose ABC transporter permease; Functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | 0.670 |
| AMQ41903.1 | rbsD | AMS64_05640 | AMS64_09400 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.863 |
| AMQ41903.1 | ribH | AMS64_05640 | AMS64_18900 | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.642 |
| AMQ43173.1 | AMQ41903.1 | AMS64_12775 | AMS64_05640 | Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
| AMQ43173.1 | purA | AMS64_12775 | AMS64_06885 | Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.418 |
| AMQ43804.1 | AMQ41903.1 | AMS64_16360 | AMS64_05640 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IUNH family. | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.593 |
| AMQ44581.1 | AMQ41903.1 | AMS64_20545 | AMS64_05640 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.569 |
| AMQ44581.1 | psuG | AMS64_20545 | AMS64_05635 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.423 |
| dadA | AMQ41903.1 | AMS64_10195 | AMS64_05640 | Amino acid dehydrogenase; Oxidative deamination of D-amino acids. | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.567 |
| dadA | rbsD | AMS64_10195 | AMS64_09400 | Amino acid dehydrogenase; Oxidative deamination of D-amino acids. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.457 |
| hisA | AMQ41903.1 | AMS64_09085 | AMS64_05640 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
| psuG | AMQ41903.1 | AMS64_05635 | AMS64_05640 | Pseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| psuG | AMQ44581.1 | AMS64_05635 | AMS64_20545 | Pseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
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