Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ40944.1 | AMQ42063.1 | AMS64_00265 | AMS64_06565 | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.624 |
| AMQ41426.1 | AMQ42063.1 | AMS64_02965 | AMS64_06565 | LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
| AMQ41635.1 | AMQ42063.1 | AMS64_04170 | AMS64_06565 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |
| AMQ41635.1 | ftsI | AMS64_04170 | AMS64_03220 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.409 |
| AMQ41747.1 | AMQ42063.1 | AMS64_04790 | AMS64_06565 | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| AMQ41747.1 | AMQ43587.1 | AMS64_04790 | AMS64_15130 | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| AMQ41747.1 | ftsI | AMS64_04790 | AMS64_03220 | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.852 |
| AMQ41747.1 | mrdA | AMS64_04790 | AMS64_06200 | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.823 |
| AMQ41747.1 | murA | AMS64_04790 | AMS64_02765 | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.546 |
| AMQ41747.1 | murC | AMS64_04790 | AMS64_03255 | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.577 |
| AMQ41993.1 | AMQ42063.1 | AMS64_06180 | AMS64_06565 | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| AMQ41993.1 | ftsI | AMS64_06180 | AMS64_03220 | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.440 |
| AMQ41993.1 | mrdA | AMS64_06180 | AMS64_06200 | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.686 |
| AMQ42063.1 | AMQ40944.1 | AMS64_06565 | AMS64_00265 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.624 |
| AMQ42063.1 | AMQ41426.1 | AMS64_06565 | AMS64_02965 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
| AMQ42063.1 | AMQ41635.1 | AMS64_06565 | AMS64_04170 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |
| AMQ42063.1 | AMQ41747.1 | AMS64_06565 | AMS64_04790 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.952 |
| AMQ42063.1 | AMQ41993.1 | AMS64_06565 | AMS64_06180 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. | 0.919 |
| AMQ42063.1 | AMQ43587.1 | AMS64_06565 | AMS64_15130 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AMQ42063.1 | ftsI | AMS64_06565 | AMS64_03220 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.652 |
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