Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ41454.1 | AMQ43578.1 | AMS64_03120 | AMS64_15085 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.768 |
| AMQ41454.1 | AMQ44707.1 | AMS64_03120 | AMS64_21280 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| AMQ41454.1 | flgG | AMS64_03120 | AMS64_03110 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgG; Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| AMQ41454.1 | flgG-2 | AMS64_03120 | AMS64_15780 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgG; Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.981 |
| AMQ41454.1 | flgH | AMS64_03120 | AMS64_03115 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal body L-ring protein; Part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AMQ41454.1 | flgH-2 | AMS64_03120 | AMS64_15775 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.987 |
| AMQ41454.1 | flgI | AMS64_03120 | AMS64_15770 | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.904 |
| AMQ43578.1 | AMQ41454.1 | AMS64_15085 | AMS64_03120 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AMQ43578.1 | AMQ44707.1 | AMS64_15085 | AMS64_21280 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
| AMQ43578.1 | flgG | AMS64_15085 | AMS64_03110 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgG; Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| AMQ43578.1 | flgG-2 | AMS64_15085 | AMS64_15780 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgG; Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.896 |
| AMQ43578.1 | flgH | AMS64_15085 | AMS64_03115 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal body L-ring protein; Part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.859 |
| AMQ43578.1 | flgH-2 | AMS64_15085 | AMS64_15775 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.870 |
| AMQ43578.1 | flgI | AMS64_15085 | AMS64_15770 | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar biosynthesis protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.796 |
| AMQ44239.1 | AMQ44707.1 | AMS64_18705 | AMS64_21280 | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
| AMQ44706.1 | AMQ44707.1 | AMS64_21275 | AMS64_21280 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
| AMQ44707.1 | AMQ41454.1 | AMS64_21280 | AMS64_03120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| AMQ44707.1 | AMQ43578.1 | AMS64_21280 | AMS64_15085 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.425 |
| AMQ44707.1 | AMQ44239.1 | AMS64_21280 | AMS64_18705 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
| AMQ44707.1 | AMQ44706.1 | AMS64_21280 | AMS64_21275 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
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