STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EMN3Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (453 aa)    
Predicted Functional Partners:
A0A0D3ERD0
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.989
A0A0D3G6L7
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.984
A0A0D3H4V2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.983
A0A0D3FI84
Uroporphyrinogen_deCOase domain-containing protein.
 
 
 0.972
A0A0D3FI98
Uroporphyrinogen_deCOase domain-containing protein.
 
 
 0.972
A0A0D3G071
Uncharacterized protein.
  
 
 0.958
A0A0D3FKF7
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
   
 
 0.949
A0A0D3GUG5
Uncharacterized protein.
     
 0.941
A0A0D3FXB9
Amino_oxidase domain-containing protein.
  
  
0.878
A0A0D3EV89
DAO domain-containing protein.
    
  0.829
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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