STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EN27Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
A0A0D3H7G8
Uncharacterized protein.
  
     0.533
A0A0D3FV01
Uncharacterized protein.
  
     0.530
A0A0D3FUD4
Terpene_synth_C domain-containing protein.
  
     0.528
A0A0D3GHY4
Uncharacterized protein.
  
     0.518
A0A0D3HML2
Uncharacterized protein.
  
     0.517
A0A0D3HI94
Uncharacterized protein.
  
     0.516
A0A0D3F2T1
Phytocyanin domain-containing protein.
  
     0.510
A0A0D3FSA2
DUF4220 domain-containing protein.
  
     0.510
A0A0D3H6P3
H15 domain-containing protein.
  
     0.509
A0A0D3FKU1
Uncharacterized protein.
  
     0.507
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.