STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EP32Uncharacterized protein. (67 aa)    
Predicted Functional Partners:
A0A0D3G3T9
Uncharacterized protein.
  
     0.533
A0A0D3EWT9
Uncharacterized protein.
  
     0.530
A0A0D3GIE7
Uncharacterized protein.
  
     0.527
A0A0D3G243
RING-CH-type domain-containing protein.
  
     0.513
A0A0D3GX69
Uncharacterized protein.
  
     0.510
A0A0D3HUQ0
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
     0.499
A0A0D3FM51
Uncharacterized protein.
  
     0.496
A0A0D3H6A8
Uncharacterized protein.
  
     0.490
A0A0D3GD70
Rx_N domain-containing protein.
  
     0.485
A0A0D3HE45
Uncharacterized protein.
  
     0.485
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.