STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3ET93TF-B3 domain-containing protein. (349 aa)    
Predicted Functional Partners:
A0A0D3GJH7
SBP-type domain-containing protein.
  
     0.521
A0A0D3G140
SBP-type domain-containing protein.
  
     0.516
A0A0D3EY00
SBP-type domain-containing protein.
  
     0.499
A0A0D3G7W6
PB1 domain-containing protein.
  
     0.499
A0A0D3EWE2
Homeobox domain-containing protein.
  
   
 0.474
A0A0D3HQD1
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
  
     0.459
A0A0D3G1A5
Uncharacterized protein.
      
 0.455
A0A0D3F9T0
Uncharacterized protein.
  
     0.433
A0A0D3FWB9
Uncharacterized protein.
  
   
 0.432
A0A0D3FYP4
SBP-type domain-containing protein.
  
     0.425
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.