STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EU06HSF_DOMAIN domain-containing protein. (440 aa)    
Predicted Functional Partners:
A0A0D3GF89
Uncharacterized protein.
    
 0.643
A0A0D3FTK5
Deacetylase sirtuin-type domain-containing protein.
    
 0.584
A0A0D3FJ66
CS domain-containing protein.
    
 0.533
A0A0D3FLZ1
CS domain-containing protein.
    
 0.533
A0A0D3GKV5
HATPase_c domain-containing protein.
    
 0.533
A0A0D3GZG3
CS domain-containing protein.
    
 0.533
A0A0D3FMG8
WD_REPEATS_REGION domain-containing protein.
     
 0.524
A0A0D3F9L2
Uncharacterized protein.
    
 0.521
A0A0D3FH33
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.511
A0A0D3FGL6
Uncharacterized protein.
    
 0.509
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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