STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EU95Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
A0A0D3EZZ5
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 
  0.653
A0A0D3FCU0
Uncharacterized protein.
   
   0.569
A0A0D3FCU3
NAB domain-containing protein.
   
   0.569
A0A0D3EPN6
Uncharacterized protein.
   
   0.529
A0A0D3ENY7
CYCLIN domain-containing protein.
  
 
   0.514
A0A0D3FGJ2
Matrin-type domain-containing protein.
   
   0.508
A0A0D3EJJ7
TFIIS N-terminal domain-containing protein.
   
  
 0.503
A0A0D3GVQ4
RRM domain-containing protein.
   
  
 0.503
A0A0D3H8I1
NAC domain-containing protein.
      
 0.450
A0A0D3H3F8
Uncharacterized protein.
   
  
 0.446
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.