STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EUR9Uncharacterized protein. (1266 aa)    
Predicted Functional Partners:
A0A0D3FBS7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.916
A0A0D3GEZ5
Uncharacterized protein.
  
0.858
A0A0D3EJH7
Uncharacterized protein; Belongs to the actin family.
    
 0.835
A0A0D3EVZ9
RuvB-like helicase; Belongs to the RuvB family.
    
 0.812
A0A0D3GMX5
RuvB-like helicase; Belongs to the RuvB family.
    
 0.812
A0A0D3FV55
Uncharacterized protein.
   
 0.810
A0A0D3GW60
Uncharacterized protein; Belongs to the actin family.
   
 0.810
A0A0D3G2L1
Uncharacterized protein.
   
 0.795
A0A0D3F523
Uncharacterized protein.
    
 0.782
A0A0D3H9K9
Uncharacterized protein.
    
 0.782
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.