A0A0D3EYB7 protein (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0D3EYB7

Uncharacterized protein. (785 aa)

Predicted Functional Partners:

A0A0D3GF57

0.726

A0A0D3FBG7

0.709

A0A0D3ER83

0.536

A0A0D3F733

0.497

A0A0D3FX21

0.497

A0A0D3EZU5

0.404

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ER83	A0A0D3EYB7	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A0D3ER83	A0A0D3EZU5	Uncharacterized protein.	Autophagy protein 5; Required for autophagy.	0.963
A0A0D3ER83	A0A0D3F733	Uncharacterized protein.	Uncharacterized protein.	0.870
A0A0D3ER83	A0A0D3FBG7	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A0D3ER83	A0A0D3FX21	Uncharacterized protein.	Uncharacterized protein.	0.870
A0A0D3ER83	A0A0D3GF57	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A0D3EYB7	A0A0D3ER83	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A0D3EYB7	A0A0D3EZU5	Uncharacterized protein.	Autophagy protein 5; Required for autophagy.	0.404
A0A0D3EYB7	A0A0D3F733	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A0D3EYB7	A0A0D3FBG7	Uncharacterized protein.	Uncharacterized protein.	0.709
A0A0D3EYB7	A0A0D3FX21	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A0D3EYB7	A0A0D3GF57	Uncharacterized protein.	Uncharacterized protein.	0.726
A0A0D3EZU5	A0A0D3ER83	Autophagy protein 5; Required for autophagy.	Uncharacterized protein.	0.963
A0A0D3EZU5	A0A0D3EYB7	Autophagy protein 5; Required for autophagy.	Uncharacterized protein.	0.404
A0A0D3EZU5	A0A0D3F733	Autophagy protein 5; Required for autophagy.	Uncharacterized protein.	0.944
A0A0D3EZU5	A0A0D3FBG7	Autophagy protein 5; Required for autophagy.	Uncharacterized protein.	0.985
A0A0D3EZU5	A0A0D3FX21	Autophagy protein 5; Required for autophagy.	Uncharacterized protein.	0.944
A0A0D3EZU5	A0A0D3GF57	Autophagy protein 5; Required for autophagy.	Uncharacterized protein.	0.560
A0A0D3F733	A0A0D3ER83	Uncharacterized protein.	Uncharacterized protein.	0.870
A0A0D3F733	A0A0D3EYB7	Uncharacterized protein.	Uncharacterized protein.	0.497