STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F078Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
A0A0D3HAE1
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
 
 0.997
A0A0D3HBI0
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
 
 0.997
A0A0D3HQC1
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
 
 0.997
A0A0D3HD26
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 0.996
A0A0D3HQC0
SGNH_hydro domain-containing protein.
  
 0.994
A0A0D3FTV3
Uncharacterized protein.
  
 0.991
A0A0D3G5B9
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
  
 0.991
A0A0D3EL24
SGNH_hydro domain-containing protein.
  
 0.988
A0A0D3FTJ9
SGNH_hydro domain-containing protein.
  
 0.988
A0A0D3GD10
Lipase_GDSL domain-containing protein.
  
 0.988
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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