Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F134Uncharacterized protein. (675 aa)    
Predicted Functional Partners:
A0A0D3FZV5
Uncharacterized protein.
  
     0.500
A0A0D3HAW3
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.500
A0A0D3FFC6
Uncharacterized protein.
  
     0.499
A0A0D3HNU6
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.496
A0A0D3GI56
Uncharacterized protein.
  
     0.495
A0A0D3HBF8
LRRNT_2 domain-containing protein.
  
     0.484
A0A0D3FTC6
Uncharacterized protein.
  
     0.483
A0A0D3GXY1
LRRNT_2 domain-containing protein.
  
     0.480
A0A0D3H4X9
LRRNT_2 domain-containing protein.
  
     0.478
A0A0D3EJV9
LRRNT_2 domain-containing protein.
  
     0.476
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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