STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F4F8Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
A0A0D3HEH8
Uncharacterized protein.
    
   0.957
A0A0D3FUG4
Uncharacterized protein.
    
   0.951
A0A0D3GIJ2
Tr-type G domain-containing protein.
    
   0.951
A0A0D3F4C8
WD_REPEATS_REGION domain-containing protein.
    
   0.927
A0A0D3FJH1
WD_REPEATS_REGION domain-containing protein.
    
   0.927
A0A0D3ETH6
Tr-type G domain-containing protein.
    
   0.562
A0A0D3ETV3
Tr-type G domain-containing protein.
    
   0.562
A0A0D3F5Q7
Tr-type G domain-containing protein.
    
   0.562
A0A0D3F660
EFG_C domain-containing protein.
    
   0.562
A0A0D3FKH0
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
    
   0.562
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.