STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F504Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
A0A0D3G6A7
Uncharacterized protein.
   
 0.711
A0A0D3F3C7
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.695
A0A0D3EY46
Myb-like domain-containing protein.
    
 0.661
A0A0D3F1E1
Uncharacterized protein.
    
 0.661
A0A0D3F5N2
Uncharacterized protein.
    
 0.661
A0A0D3FDX4
Uncharacterized protein.
    
 0.661
A0A0D3FM56
Myb-like domain-containing protein.
    
 0.661
A0A0D3FM57
Uncharacterized protein.
    
 0.661
A0A0D3FVB1
Uncharacterized protein.
    
 0.661
A0A0D3GK40
Uncharacterized protein.
    
 0.661
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.