STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F59740S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (220 aa)    
Predicted Functional Partners:
A0A0D3FCT3
Uncharacterized protein.
   
 0.997
A0A0D3FE92
Uncharacterized protein.
   
 0.997
A0A0D3HHN8
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.997
A0A0D3EN93
Ubiquitin-like domain-containing protein.
   
 0.996
A0A0D3GDD1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.996
A0A0D3GN28
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.996
A0A0D3GVS2
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.994
A0A0D3HIP3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.994
A0A0D3EMK1
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.993
A0A0D3F3R7
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.993
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.