STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F8I4MSP domain-containing protein. (264 aa)    
Predicted Functional Partners:
A0A0D3EKA7
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.666
A0A0D3GNL1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
    
 0.612
A0A0D3FGT2
Uncharacterized protein; Belongs to the OSBP family.
    
 0.610
A0A0D3FMZ9
PH domain-containing protein.
 
  
 0.610
A0A0D3GWG9
Uncharacterized protein.
 
  
 0.610
A0A0D3HGG7
PH domain-containing protein.
 
  
 0.610
A0A0D3HTD6
PH domain-containing protein.
 
  
 0.610
A0A0D3G6N8
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.505
A0A0D3HRY2
Uncharacterized protein.
   
 0.505
A0A0D3FN49
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.504
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.