STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3F9W2Uncharacterized protein. (244 aa)    
Predicted Functional Partners:
A0A0D3FV16
SWIB domain-containing protein.
   
 0.995
A0A0D3GTE7
BAF250_C domain-containing protein.
    
 0.992
A0A0D3FV55
Uncharacterized protein.
   
 0.989
A0A0D3GW60
Uncharacterized protein; Belongs to the actin family.
   
 0.989
A0A0D3H9K9
Uncharacterized protein.
   
 
 0.962
A0A0D3F523
Uncharacterized protein.
   
 
 0.953
A0A0D3F1X6
Uncharacterized protein.
   
 0.948
A0A0D3EX37
Uncharacterized protein.
   
 0.942
A0A0D3HIZ5
Uncharacterized protein.
   
 0.941
A0A0D3HS04
Uncharacterized protein.
   
 0.941
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.