STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FAS0Uncharacterized protein. (1195 aa)    
Predicted Functional Partners:
A0A0D3H180
Uncharacterized protein.
    
 
 0.938
A0A0D3F0D2
Protein kinase domain-containing protein.
    
   0.901
A0A0D3FX91
HORMA domain-containing protein.
   
 0.864
A0A0D3HF97
Uncharacterized protein.
   
 
 0.864
A0A0D3G0T2
Uncharacterized protein.
   
 
 0.856
A0A0D3FIT1
Uncharacterized protein.
  
 
 0.752
A0A0D3EV74
Uncharacterized protein.
  
 
 0.750
A0A0D3GU55
Uncharacterized protein.
  
 
 0.736
A0A0D3FKN8
Uncharacterized protein.
   
 
 0.725
A0A0D3GWN2
Uncharacterized protein.
   
 
 0.725
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.