STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FD95Uncharacterized protein. (634 aa)    
Predicted Functional Partners:
A0A0D3EU71
Uncharacterized protein.
     
 0.871
A0A0D3H1V1
Aminotran_5 domain-containing protein.
    
 0.735
A0A0D3GNC2
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
   
 0.723
A0A0D3GGP0
Uncharacterized protein.
   
 0.711
A0A0D3GQG9
Uncharacterized protein.
   
 0.711
A0A0D3FDH1
Uncharacterized protein.
    
 0.696
A0A0D3HHU4
Uncharacterized protein.
    
 0.684
A0A0D3HR19
Uncharacterized protein.
    
 0.684
A0A0D3EWB2
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.680
A0A0D3FPA9
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.680
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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