STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3FEK9Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (892 aa)    
Predicted Functional Partners:
A0A0D3FPI0
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.936
A0A0D3EUB3
PNPLA domain-containing protein.
     
 0.935
A0A0D3FQI6
PNPLA domain-containing protein.
     
 0.935
A0A0D3EZN6
Uncharacterized protein.
   
 
 0.919
A0A0D3HU60
Uncharacterized protein.
    
 0.893
A0A0D3HMW3
Uncharacterized protein.
     
 0.883
A0A0D3HI61
Lipase_3 domain-containing protein.
    
 0.880
A0A0D3FFP6
Uncharacterized protein.
   
 
 0.869
A0A0D3FMV3
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
  
 
0.828
A0A0D3H1Z9
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
  
 
0.799
Your Current Organism:
Oryza barthii
NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.
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